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dbVar

Database of genomic structural variation

nsv437858

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:115,447

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1772 SVs from 92 studies. See in: genome view

Remapped(Score: Perfect):162,793,351-162,908,797

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv437858	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	162,793,351	162,821,488	162,887,555	162,908,797
nsv437858	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	162,511,139	162,539,276	162,605,343	162,626,585
nsv437858	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000003.8	Chr3	163,832,052	163,860,189	163,926,256	163,947,498

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv467739	copy number loss	NA07048	SNP array	SNP genotyping analysis	Heterozygous	19

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv467739	Remapped	Perfect	NC_000003.12:g.(16 2793351_162821488) _(162887555_162908 797)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	162,793,351	162,821,488	162,887,555	162,908,797
nssv467739	Remapped	Perfect	NC_000003.11:g.(16 2511139_162539276) _(162605343_162626 585)del	GRCh37.p13	First Pass	NC_000003.11	Chr3	162,511,139	162,539,276	162,605,343	162,626,585
nssv467739	Submitted genomic		NC_000003.8:g.(163 832052_163860189)_ (163926256_1639474 98)del	NCBI34 (hg16)		NC_000003.8	Chr3	163,832,052	163,860,189	163,926,256	163,947,498

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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