nsv1067822
- Organism: Homo sapiens
- Study:nstd98 (Campbell et al. 2014b)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:876,797
- Publication(s):Campbell et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2225 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 2225 SVs from 100 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1067822 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 77,091,551 | 77,091,614 | 77,968,284 | 77,968,347 |
| nsv1067822 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 77,318,677 | 77,318,740 | 78,195,410 | 78,195,473 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3761525 | deletion | Sequencing | Sequence alignment |
| nssv3761526 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3761525 | Remapped | Perfect | NC_000002.12:g.(77 091551_77091614)_( 77968284_77968347) del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 77,091,551 | 77,091,614 | 77,968,284 | 77,968,347 |
| nssv3761526 | Remapped | Perfect | NC_000002.12:g.(77 091551_77091614)_( 77968284_77968347) del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 77,091,551 | 77,091,614 | 77,968,284 | 77,968,347 |
| nssv3761525 | Submitted genomic | NC_000002.11:g.(77 318677_77318740)_( 78195410_78195473) del | GRCh37 (hg19) | NC_000002.11 | Chr2 | 77,318,677 | 77,318,740 | 78,195,410 | 78,195,473 | ||
| nssv3761526 | Submitted genomic | NC_000002.11:g.(77 318677_77318740)_( 78195410_78195473) del | GRCh37 (hg19) | NC_000002.11 | Chr2 | 77,318,677 | 77,318,740 | 78,195,410 | 78,195,473 |