nsv1069251
- Organism: Homo sapiens
- Study:nstd99 (Thareja et al. 2015)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Thareja et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 458 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 445 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 458 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 445 SVs from 49 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv1069251 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 137,327,880 | 137,327,880 | not reported |
| nsv1069251 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 137,328,375 | 137,328,375 | not reported |
| nsv1069251 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 140,222,332 | 140,222,332 | not reported | ||
| nsv1069251 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 140,222,827 | 140,222,827 | not reported |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3763773 | intrachromosomal translocation | KWP1 | Sequencing | Read depth and paired-end mapping | 11,116 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv3763773 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 137,327,880 | 137,327,880 | not reported |
| nssv3763773 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 137,328,375 | 137,328,375 | not reported |
| nssv3763773 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 140,222,332 | 140,222,332 | not reported | ||
| nssv3763773 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 140,222,827 | 140,222,827 | not reported |