Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv1116557

Organism: Homo sapiens

Study:nstd106 (Alsmadi et al. 2014)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:32,479

Publication(s):Alsmadi et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 294 SVs from 53 studies. See in: genome view

Remapped(Score: Perfect):115,953,455-115,985,933

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv1116557	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	115,953,455	115,985,933
nsv1116557	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	116,274,618	116,307,096

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3961397	inversion	KWS1	Sequencing	Read depth and paired-end mapping	22,470
nssv3993528	inversion	KWS2	Sequencing	Read depth and paired-end mapping	21,718

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv3961397	Remapped	Perfect	NC_000006.12:g.(11 5953455_?)_(?_1159 85933)inv	GRCh38.p12	First Pass	NC_000006.12	Chr6	115,953,455	115,985,933
nssv3993528	Remapped	Perfect	NC_000006.12:g.(11 5953455_?)_(?_1159 85933)inv	GRCh38.p12	First Pass	NC_000006.12	Chr6	115,953,455	115,985,933
nssv3961397	Submitted genomic		NC_000006.11:g.(11 6274618_?)_(?_1163 07096)inv	GRCh37 (hg19)		NC_000006.11	Chr6	116,274,618	116,307,096
nssv3993528	Submitted genomic		NC_000006.11:g.(11 6274618_?)_(?_1163 07096)inv	GRCh37 (hg19)		NC_000006.11	Chr6	116,274,618	116,307,096

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI