nsv1125939
- Organism: Homo sapiens
- Study:nstd106 (Alsmadi et al. 2014)
- Variant Type:tandem duplication
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:30,539
- Publication(s):Alsmadi et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 460 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 224 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 460 SVs from 47 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv1125939 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 9,389,583 | 9,420,061 |
nsv1125939 | Remapped | Good | GRCh38.p12 | PATCHES | Second Pass | NW_018654717.1 | Chr8|NW_01 8654717.1 | 3,931,408 | 3,961,946 |
nsv1125939 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 9,247,093 | 9,277,571 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv3964902 | Remapped | Good | NW_018654717.1:g.( 3931408_?)_(?_3961 946)dup | GRCh38.p12 | Second Pass | NW_018654717.1 | Chr8|NW_01 8654717.1 | 3,931,408 | 3,961,946 |
nssv3980386 | Remapped | Good | NW_018654717.1:g.( 3931408_?)_(?_3961 946)dup | GRCh38.p12 | Second Pass | NW_018654717.1 | Chr8|NW_01 8654717.1 | 3,931,408 | 3,961,946 |
nssv3964902 | Remapped | Perfect | NC_000008.11:g.(93 89583_?)_(?_942006 1)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 9,389,583 | 9,420,061 |
nssv3980386 | Remapped | Perfect | NC_000008.11:g.(93 89583_?)_(?_942006 1)dup | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 9,389,583 | 9,420,061 |
nssv3964902 | Submitted genomic | NC_000008.10:g.(92 47093_?)_(?_927757 1)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 9,247,093 | 9,277,571 | ||
nssv3980386 | Submitted genomic | NC_000008.10:g.(92 47093_?)_(?_927757 1)dup | GRCh37 (hg19) | NC_000008.10 | Chr8 | 9,247,093 | 9,277,571 |