nsv1130969
- Organism: Homo sapiens
- Study:nstd106 (Alsmadi et al. 2014)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:77,445
- Publication(s):Alsmadi et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 610 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 556 SVs from 49 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1130969 | Remapped | Good | GRCh38.p12 | Primary Assembly | Second Pass | NC_000001.11 | Chr1 | 146,870,866 | 146,948,310 |
| nsv1130969 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 146,306,100 | 146,383,500 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3967671 | deletion | KWS2 | Sequencing | Read depth and paired-end mapping | 21,718 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3967671 | Remapped | Good | NC_000001.11:g.(14 6870866_?)_(?_1469 48310)del | GRCh38.p12 | Second Pass | NC_000001.11 | Chr1 | 146,870,866 | 146,948,310 |
| nssv3967671 | Submitted genomic | NC_000001.10:g.(14 6306100_?)_(?_1463 83500)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 146,306,100 | 146,383,500 |