nsv1153438
- Organism: Homo sapiens
- Study:nstd107 (John et al. 2014)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:95,147
- Publication(s):John et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 641 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 623 SVs from 48 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1153438 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 149,654,076 | 149,749,222 |
| nsv1153438 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 148,735,744 | 148,830,883 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv4001357 | inversion | KWB1 | Sequencing | Read depth and paired-end mapping | 8,440 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4001357 | Remapped | Good | NC_000023.11:g.(14 9654076_?)_(?_1497 49222)inv | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 149,654,076 | 149,749,222 |
| nssv4001357 | Submitted genomic | NC_000023.10:g.(14 8735744_?)_(?_1488 30883)inv | GRCh37 (hg19) | NC_000023.10 | ChrX | 148,735,744 | 148,830,883 |