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dbVar

Database of genomic structural variation

nsv1153532

Organism: Homo sapiens

Study:nstd107 (John et al. 2014)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):John et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 235 SVs from 26 studies. See in: genome view

Remapped(Score: Perfect):33,187,145-33,187,145

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1153532	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000021.9	Chr21	33,187,145	33,187,145	not reported
nsv1153532	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000021.9	Chr21	33,187,184	33,187,184	not reported
nsv1153532	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000021.8	Chr21	34,559,450	34,559,450	not reported
nsv1153532	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000021.8	Chr21	34,559,489	34,559,489	not reported

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv4002185	intrachromosomal translocation	KWB1	Sequencing	Read depth and paired-end mapping	8,440

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv4002185	Remapped	Perfect	GRCh38.p12	First Pass	NC_000021.9	Chr21	33,187,145	33,187,145	not reported
nssv4002185	Remapped	Perfect	GRCh38.p12	First Pass	NC_000021.9	Chr21	33,187,184	33,187,184	not reported
nssv4002185	Submitted genomic		GRCh37 (hg19)		NC_000021.8	Chr21	34,559,450	34,559,450	not reported
nssv4002185	Submitted genomic		GRCh37 (hg19)		NC_000021.8	Chr21	34,559,489	34,559,489	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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