Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv1153794

Organism: Homo sapiens

Study:nstd107 (John et al. 2014)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):John et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 114 SVs from 19 studies. See in: genome view

Remapped(Score: Perfect):156,517,425-156,517,425

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1153794	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	156,517,425	156,517,425	-
nsv1153794	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	139,349,863	139,349,863	-
nsv1153794	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	156,487,217	156,487,217	-
nsv1153794	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	140,271,017	140,271,017	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv4002449	interchromosomal translocation	KWB1	Sequencing	Read depth and paired-end mapping	8,440

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv4002449	Remapped	Perfect	GRCh38.p12	First Pass	NC_000001.11	Chr1	156,517,425	156,517,425	-
nssv4002449	Remapped	Perfect	GRCh38.p12	First Pass	NC_000004.12	Chr4	139,349,863	139,349,863	-
nssv4002449	Submitted genomic		GRCh37 (hg19)		NC_000001.10	Chr1	156,487,217	156,487,217	-
nssv4002449	Submitted genomic		GRCh37 (hg19)		NC_000004.11	Chr4	140,271,017	140,271,017	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI