nsv1153896
- Organism: Homo sapiens
- Study:nstd107 (John et al. 2014)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:375
- Publication(s):John et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 202 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 202 SVs from 57 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1153896 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 47,894,810 | 47,895,184 |
| nsv1153896 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 46,523,554 | 46,523,928 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv4003176 | insertion | KWB1 | Sequencing | Read depth and paired-end mapping | 8,440 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4003176 | Remapped | Perfect | NC_000020.11:g.(47 894810_?)_(?_47895 184)ins? | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 47,894,810 | 47,895,184 |
| nssv4003176 | Submitted genomic | NC_000020.10:g.(46 523554_?)_(?_46523 928)ins(0_?) | GRCh37 (hg19) | NC_000020.10 | Chr20 | 46,523,554 | 46,523,928 |