nsv1154128
- Organism: Homo sapiens
- Study:nstd107 (John et al. 2014)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):John et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 136 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 256 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 136 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 256 SVs from 29 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv1154128 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 143,082,425 | 143,082,425 | - |
nsv1154128 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 176,969,644 | 176,969,644 | - |
nsv1154128 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 143,839,994 | 143,839,994 | - | ||
nsv1154128 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 177,890,798 | 177,890,798 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv4003404 | interchromosomal translocation | KWB1 | Sequencing | Read depth and paired-end mapping | 8,440 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv4003404 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 143,082,425 | 143,082,425 | - |
nssv4003404 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 176,969,644 | 176,969,644 | - |
nssv4003404 | Submitted genomic | GRCh37 (hg19) | NC_000002.11 | Chr2 | 143,839,994 | 143,839,994 | - | ||
nssv4003404 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 177,890,798 | 177,890,798 | - |