nsv1154396
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:181,789
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1374 SVs from 94 studies. See in: genome view
Overlapping variant regions from other studies: 1374 SVs from 94 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154396 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 136,669,376 | 136,670,116 | 136,850,192 | 136,851,164 |
| nsv1154396 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 137,681,619 | 137,682,359 | 137,862,435 | 137,863,407 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4005060 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4005060 | Remapped | Perfect | NC_000008.11:g.(13 6669376_136670116) _(136850192_136851 164)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,669,376 | 136,670,116 | 136,850,192 | 136,851,164 |
| nssv4005060 | Submitted genomic | NC_000008.10:g.(13 7681619_137682359) _(137862435_137863 407)del | GRCh37 (hg19) | NC_000008.10 | Chr8 | 137,681,619 | 137,682,359 | 137,862,435 | 137,863,407 |