nsv1154442
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:214,414
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3208 SVs from 99 studies. See in: genome view
Overlapping variant regions from other studies: 3212 SVs from 99 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154442 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 11,975,464 | 11,975,493 | 12,182,949 | 12,189,877 |
| nsv1154442 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 11,975,464 | 11,975,493 | 12,182,949 | 12,189,877 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4006273 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4006273 | Remapped | Perfect | NC_000009.12:g.(11 975464_11975493)_( 12182949_12189877) del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 11,975,464 | 11,975,493 | 12,182,949 | 12,189,877 |
| nssv4006273 | Submitted genomic | NC_000009.11:g.(11 975464_11975493)_( 12182949_12189877) del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 11,975,464 | 11,975,493 | 12,182,949 | 12,189,877 |