nsv1154444
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:102,398
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2361 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 2365 SVs from 93 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154444 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 |
| nsv1154444 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4006275 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4006276 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4006275 | Remapped | Perfect | NC_000009.12:g.(12 007658_12008577)_( 12101848_12110055) del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 |
| nssv4006276 | Remapped | Perfect | NC_000009.12:g.(12 007658_12008577)_( 12101848_12110055) del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 |
| nssv4006275 | Submitted genomic | NC_000009.11:g.(12 007658_12008577)_( 12101848_12110055) del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 | ||
| nssv4006276 | Submitted genomic | NC_000009.11:g.(12 007658_12008577)_( 12101848_12110055) del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 12,007,658 | 12,008,577 | 12,101,848 | 12,110,055 |