nsv1154550
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:144,154
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 404 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 404 SVs from 55 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154550 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 8,827,870 | 8,831,330 | 8,969,912 | 8,972,023 |
| nsv1154550 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 8,869,833 | 8,873,293 | 9,011,875 | 9,013,986 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4004587 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4004587 | Remapped | Perfect | NC_000010.11:g.(88 27870_8831330)_(89 69912_8972023)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 8,827,870 | 8,831,330 | 8,969,912 | 8,972,023 |
| nssv4004587 | Submitted genomic | NC_000010.10:g.(88 69833_8873293)_(90 11875_9013986)del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 8,869,833 | 8,873,293 | 9,011,875 | 9,013,986 |