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dbVar

Database of genomic structural variation

nsv1154573

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:110,317

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 418 SVs from 59 studies. See in: genome view

Remapped(Score: Perfect):37,446,839-37,557,155

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1154573	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	37,446,839	37,453,228	37,552,381	37,557,155
nsv1154573	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	37,735,767	37,742,156	37,841,309	37,846,083

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4004708	deletion	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4004708	Remapped	Perfect	NC_000010.11:g.(37 446839_37453228)_( 37552381_37557155) del	GRCh38.p12	First Pass	NC_000010.11	Chr10	37,446,839	37,453,228	37,552,381	37,557,155
nssv4004708	Submitted genomic		NC_000010.10:g.(37 735767_37742156)_( 37841309_37846083) del	GRCh37 (hg19)		NC_000010.10	Chr10	37,735,767	37,742,156	37,841,309	37,846,083

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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