nsv1154579
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:24
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,285
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 166 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 166 SVs from 54 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154579 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nsv1154579 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4004713 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004714 | deletion | SNP array | SNP genotyping analysis | 0 |
| nssv4004715 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004716 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004717 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004718 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004719 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004720 | deletion | SNP array | SNP genotyping analysis | 0 |
| nssv4004721 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004722 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004723 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004724 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004725 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004726 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004727 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004728 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004729 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004730 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004731 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004732 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004733 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004734 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004735 | deletion | SNP array | SNP genotyping analysis | 1 |
| nssv4004736 | duplication | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4004713 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004714 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004715 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004716 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004717 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004718 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004719 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004720 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004721 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004722 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004723 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004724 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004725 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004726 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004727 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004728 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004729 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004730 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004731 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004732 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004733 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004734 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004735 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004736 | Remapped | Perfect | NC_000010.11:g.(45 574604_45577424)_( 45580787_45584888) dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 45,574,604 | 45,577,424 | 45,580,787 | 45,584,888 |
| nssv4004713 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004714 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004715 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004716 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004717 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004718 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004719 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004720 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004721 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004722 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004723 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004724 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004725 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004726 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004727 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004728 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004729 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004730 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004731 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004732 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004733 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004734 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004735 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 | ||
| nssv4004736 | Submitted genomic | NC_000010.10:g.(46 070052_46072872)_( 46076235_46080336) dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,070,052 | 46,072,872 | 46,076,235 | 46,080,336 |