nsv1154701

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:30
Validation:Not tested
Clinical Assertions: No
Region Size:21,147

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 855 SVs from 91 studies. See in: genome view

Remapped(Score: Perfect):18,919,323-18,940,469

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1154701	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nsv1154701	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4005758	deletion	SNP array	SNP genotyping analysis	1
nssv4005759	deletion	SNP array	SNP genotyping analysis	1
nssv4005760	duplication	SNP array	SNP genotyping analysis	3
nssv4005761	duplication	SNP array	SNP genotyping analysis	3
nssv4005762	duplication	SNP array	SNP genotyping analysis	4
nssv4005763	deletion	SNP array	SNP genotyping analysis	1
nssv4005764	deletion	SNP array	SNP genotyping analysis	1
nssv4005765	duplication	SNP array	SNP genotyping analysis	3
nssv4005766	duplication	SNP array	SNP genotyping analysis	3
nssv4005767	deletion	SNP array	SNP genotyping analysis	1
nssv4005768	duplication	SNP array	SNP genotyping analysis	3
nssv4005769	duplication	SNP array	SNP genotyping analysis	3
nssv4005770	duplication	SNP array	SNP genotyping analysis	3
nssv4005771	duplication	SNP array	SNP genotyping analysis	3
nssv4005772	duplication	SNP array	SNP genotyping analysis	3
nssv4005773	duplication	SNP array	SNP genotyping analysis	3
nssv4005774	duplication	SNP array	SNP genotyping analysis	3
nssv4005775	deletion	SNP array	SNP genotyping analysis	1
nssv4005776	duplication	SNP array	SNP genotyping analysis	3
nssv4005777	duplication	SNP array	SNP genotyping analysis	3
nssv4005778	deletion	SNP array	SNP genotyping analysis	1
nssv4005779	duplication	SNP array	SNP genotyping analysis	3
nssv4005780	duplication	SNP array	SNP genotyping analysis	4
nssv4005781	duplication	SNP array	SNP genotyping analysis	3
nssv4005782	deletion	SNP array	SNP genotyping analysis	1
nssv4006711	duplication	SNP array	SNP genotyping analysis	3
nssv4006712	duplication	SNP array	SNP genotyping analysis	3
nssv4006713	duplication	SNP array	SNP genotyping analysis	3
nssv4006714	duplication	SNP array	SNP genotyping analysis	3
nssv4006715	duplication	SNP array	SNP genotyping analysis	4

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4005758	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005759	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005760	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005761	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005762	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005763	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005764	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005765	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005766	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005767	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005768	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005769	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005770	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005771	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005772	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005773	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005774	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005775	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005776	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005777	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005778	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005779	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005780	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005781	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005782	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4006711	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4006712	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4006713	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4006714	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4006715	Remapped	Perfect	NC_000011.10:g.(18 919323_18927525)_( 18940441_18940469) dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	18,919,323	18,927,525	18,940,441	18,940,469
nssv4005758	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005759	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005760	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005761	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005762	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005763	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005764	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005765	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005766	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005767	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005768	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005769	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005770	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005771	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005772	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005773	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005774	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005775	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005776	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005777	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005778	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005779	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005780	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005781	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4005782	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d el	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4006711	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4006712	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4006713	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4006714	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016
nssv4006715	Submitted genomic		NC_000011.9:g.(189 40870_18949072)_(1 8961988_18962016)d up	GRCh37 (hg19)		NC_000011.9	Chr11	18,940,870	18,949,072	18,961,988	18,962,016

dbVar

Database of genomic structural variation

nsv1154701

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant