nsv1154846
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:152,629
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 481 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 481 SVs from 62 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1154846 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 86,561,888 | 86,573,062 | 86,710,541 | 86,714,516 |
| nsv1154846 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 86,955,665 | 86,966,839 | 87,104,318 | 87,108,293 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4010276 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4010276 | Remapped | Perfect | NC_000012.12:g.(86 561888_86573062)_( 86710541_86714516) del | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 86,561,888 | 86,573,062 | 86,710,541 | 86,714,516 |
| nssv4010276 | Submitted genomic | NC_000012.11:g.(86 955665_86966839)_( 87104318_87108293) del | GRCh37 (hg19) | NC_000012.11 | Chr12 | 86,955,665 | 86,966,839 | 87,104,318 | 87,108,293 |