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dbVar

Database of genomic structural variation

nsv1154847

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:11,771

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 203 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):87,132,845-87,144,615

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1154847	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	87,132,845	87,137,136	87,139,484	87,144,615
nsv1154847	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	87,526,622	87,530,913	87,533,261	87,538,392

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4010277	deletion	SNP array	SNP genotyping analysis	1
nssv4010278	deletion	SNP array	SNP genotyping analysis	1
nssv4010279	duplication	SNP array	SNP genotyping analysis	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4010277	Remapped	Perfect	NC_000012.12:g.(87 132845_87137136)_( 87139484_87144615) del	GRCh38.p12	First Pass	NC_000012.12	Chr12	87,132,845	87,137,136	87,139,484	87,144,615
nssv4010278	Remapped	Perfect	NC_000012.12:g.(87 132845_87137136)_( 87139484_87144615) del	GRCh38.p12	First Pass	NC_000012.12	Chr12	87,132,845	87,137,136	87,139,484	87,144,615
nssv4010279	Remapped	Perfect	NC_000012.12:g.(87 132845_87137136)_( 87139484_87144615) dup	GRCh38.p12	First Pass	NC_000012.12	Chr12	87,132,845	87,137,136	87,139,484	87,144,615
nssv4010277	Submitted genomic		NC_000012.11:g.(87 526622_87530913)_( 87533261_87538392) del	GRCh37 (hg19)		NC_000012.11	Chr12	87,526,622	87,530,913	87,533,261	87,538,392
nssv4010278	Submitted genomic		NC_000012.11:g.(87 526622_87530913)_( 87533261_87538392) del	GRCh37 (hg19)		NC_000012.11	Chr12	87,526,622	87,530,913	87,533,261	87,538,392
nssv4010279	Submitted genomic		NC_000012.11:g.(87 526622_87530913)_( 87533261_87538392) dup	GRCh37 (hg19)		NC_000012.11	Chr12	87,526,622	87,530,913	87,533,261	87,538,392

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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