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dbVar

Database of genomic structural variation

nsv1154901

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:116,291

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 532 SVs from 46 studies. See in: genome view

Remapped(Score: Perfect):56,475,381-56,591,671

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1154901	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	56,475,381	56,479,678	56,588,432	56,591,671
nsv1154901	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	57,049,515	57,053,812	57,162,566	57,165,805

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4008108	deletion	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4008108	Remapped	Perfect	NC_000013.11:g.(56 475381_56479678)_( 56588432_56591671) del	GRCh38.p12	First Pass	NC_000013.11	Chr13	56,475,381	56,479,678	56,588,432	56,591,671
nssv4008108	Submitted genomic		NC_000013.10:g.(57 049515_57053812)_( 57162566_57165805) del	GRCh37 (hg19)		NC_000013.10	Chr13	57,049,515	57,053,812	57,162,566	57,165,805

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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