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dbVar

Database of genomic structural variation

nsv1155200

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:10,332

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 167 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):80,227,841-80,238,172

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1155200	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	80,227,841	80,230,629	80,234,268	80,238,172
nsv1155200	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	80,520,183	80,522,971	80,526,610	80,530,514

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4012131	deletion	SNP array	SNP genotyping analysis	1
nssv4012132	duplication	SNP array	SNP genotyping analysis	4
nssv4012133	duplication	SNP array	SNP genotyping analysis	4

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4012131	Remapped	Perfect	NC_000015.10:g.(80 227841_80230629)_( 80234268_80238172) del	GRCh38.p12	First Pass	NC_000015.10	Chr15	80,227,841	80,230,629	80,234,268	80,238,172
nssv4012132	Remapped	Perfect	NC_000015.10:g.(80 227841_80230629)_( 80234268_80238172) dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	80,227,841	80,230,629	80,234,268	80,238,172
nssv4012133	Remapped	Perfect	NC_000015.10:g.(80 227841_80230629)_( 80234268_80238172) dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	80,227,841	80,230,629	80,234,268	80,238,172
nssv4012131	Submitted genomic		NC_000015.9:g.(805 20183_80522971)_(8 0526610_80530514)d el	GRCh37 (hg19)		NC_000015.9	Chr15	80,520,183	80,522,971	80,526,610	80,530,514
nssv4012132	Submitted genomic		NC_000015.9:g.(805 20183_80522971)_(8 0526610_80530514)d up	GRCh37 (hg19)		NC_000015.9	Chr15	80,520,183	80,522,971	80,526,610	80,530,514
nssv4012133	Submitted genomic		NC_000015.9:g.(805 20183_80522971)_(8 0526610_80530514)d up	GRCh37 (hg19)		NC_000015.9	Chr15	80,520,183	80,522,971	80,526,610	80,530,514

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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