nsv1155286
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:160,181
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 975 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 975 SVs from 83 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv1155286 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 35,590,727 | 35,593,868 | 35,742,970 | 35,750,907 |
nsv1155286 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 35,815,793 | 35,818,934 | 35,968,036 | 35,975,973 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv4007643 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv4007643 | Remapped | Perfect | NC_000002.12:g.(35 590727_35593868)_( 35742970_35750907) del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 35,590,727 | 35,593,868 | 35,742,970 | 35,750,907 |
nssv4007643 | Submitted genomic | NC_000002.11:g.(35 815793_35818934)_( 35968036_35975973) del | GRCh37 (hg19) | NC_000002.11 | Chr2 | 35,815,793 | 35,818,934 | 35,968,036 | 35,975,973 |