nsv1155998
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:146,058
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 449 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 449 SVs from 51 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1155998 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 85,581,008 | 85,589,241 | 85,724,431 | 85,727,065 |
| nsv1155998 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 85,630,158 | 85,638,391 | 85,773,581 | 85,776,215 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4017672 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4017672 | Remapped | Perfect | NC_000003.12:g.(85 581008_85589241)_( 85724431_85727065) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 85,581,008 | 85,589,241 | 85,724,431 | 85,727,065 |
| nssv4017672 | Submitted genomic | NC_000003.11:g.(85 630158_85638391)_( 85773581_85776215) del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 85,630,158 | 85,638,391 | 85,773,581 | 85,776,215 |