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dbVar

Database of genomic structural variation

nsv1156129

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:315,464

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 808 SVs from 62 studies. See in: genome view

Remapped(Score: Perfect):27,070,110-27,385,573

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1156129	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	27,070,110	27,077,228	27,375,630	27,385,573
nsv1156129	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	27,071,732	27,078,850	27,377,252	27,387,195

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4014122	deletion	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4014122	Remapped	Perfect	NC_000004.12:g.(27 070110_27077228)_( 27375630_27385573) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	27,070,110	27,077,228	27,375,630	27,385,573
nssv4014122	Submitted genomic		NC_000004.11:g.(27 071732_27078850)_( 27377252_27387195) del	GRCh37 (hg19)		NC_000004.11	Chr4	27,071,732	27,078,850	27,377,252	27,387,195

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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