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dbVar

Database of genomic structural variation

nsv1156202

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:9,922

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 182 SVs from 42 studies. See in: genome view

Remapped(Score: Perfect):96,395,896-96,405,817

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1156202	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	96,395,896	96,399,079	96,401,252	96,405,817
nsv1156202	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	97,317,047	97,320,230	97,322,403	97,326,968

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4014726	deletion	SNP array	SNP genotyping analysis	1
nssv4014727	duplication	SNP array	SNP genotyping analysis	3
nssv4014728	deletion	SNP array	SNP genotyping analysis	1
nssv4014729	deletion	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4014726	Remapped	Perfect	NC_000004.12:g.(96 395896_96399079)_( 96401252_96405817) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	96,395,896	96,399,079	96,401,252	96,405,817
nssv4014727	Remapped	Perfect	NC_000004.12:g.(96 395896_96399079)_( 96401252_96405817) dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	96,395,896	96,399,079	96,401,252	96,405,817
nssv4014728	Remapped	Perfect	NC_000004.12:g.(96 395896_96399079)_( 96401252_96405817) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	96,395,896	96,399,079	96,401,252	96,405,817
nssv4014729	Remapped	Perfect	NC_000004.12:g.(96 395896_96399079)_( 96401252_96405817) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	96,395,896	96,399,079	96,401,252	96,405,817
nssv4014726	Submitted genomic		NC_000004.11:g.(97 317047_97320230)_( 97322403_97326968) del	GRCh37 (hg19)		NC_000004.11	Chr4	97,317,047	97,320,230	97,322,403	97,326,968
nssv4014727	Submitted genomic		NC_000004.11:g.(97 317047_97320230)_( 97322403_97326968) dup	GRCh37 (hg19)		NC_000004.11	Chr4	97,317,047	97,320,230	97,322,403	97,326,968
nssv4014728	Submitted genomic		NC_000004.11:g.(97 317047_97320230)_( 97322403_97326968) del	GRCh37 (hg19)		NC_000004.11	Chr4	97,317,047	97,320,230	97,322,403	97,326,968
nssv4014729	Submitted genomic		NC_000004.11:g.(97 317047_97320230)_( 97322403_97326968) del	GRCh37 (hg19)		NC_000004.11	Chr4	97,317,047	97,320,230	97,322,403	97,326,968

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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