nsv1156204
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:16
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,335
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 248 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 248 SVs from 66 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv1156204 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nsv1156204 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv4014731 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4014732 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4014733 | duplication | SNP array | SNP genotyping analysis | 3 |
nssv4014734 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015378 | deletion | SNP array | SNP genotyping analysis | 0 |
nssv4015379 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015380 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015381 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015382 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015383 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015384 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015385 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015386 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015387 | deletion | SNP array | SNP genotyping analysis | 0 |
nssv4015388 | deletion | SNP array | SNP genotyping analysis | 1 |
nssv4015389 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv4014731 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4014732 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4014733 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4014734 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015378 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015379 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015380 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015381 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015382 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015383 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015384 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015385 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015386 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015387 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015388 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4015389 | Remapped | Perfect | NC_000004.12:g.(97 250644_97251263)_( 97263981_97267978) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 97,250,644 | 97,251,263 | 97,263,981 | 97,267,978 |
nssv4014731 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4014732 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4014733 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4014734 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015378 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015379 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015380 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015381 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015382 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015383 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015384 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015385 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015386 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015387 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015388 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 | ||
nssv4015389 | Submitted genomic | NC_000004.11:g.(98 171795_98172414)_( 98185132_98189129) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 98,171,795 | 98,172,414 | 98,185,132 | 98,189,129 |