nsv1156225
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:208,805
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 741 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 741 SVs from 79 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv1156225 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 132,639,974 | 132,640,556 | 132,848,279 | 132,848,778 |
nsv1156225 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 133,561,129 | 133,561,711 | 133,769,434 | 133,769,933 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv4015591 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv4015591 | Remapped | Perfect | NC_000004.12:g.(13 2639974_132640556) _(132848279_132848 778)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 132,639,974 | 132,640,556 | 132,848,279 | 132,848,778 |
nssv4015591 | Submitted genomic | NC_000004.11:g.(13 3561129_133561711) _(133769434_133769 933)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 133,561,129 | 133,561,711 | 133,769,434 | 133,769,933 |