nsv1156325
- Organism: Homo sapiens
- Study:nstd97 (Lou et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:130,263
- Publication(s):Lou et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 749 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 749 SVs from 74 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv1156325 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 27,486,816 | 27,489,655 | 27,609,204 | 27,617,078 |
nsv1156325 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 27,486,923 | 27,489,762 | 27,609,311 | 27,617,185 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv4020745 | deletion | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv4020745 | Remapped | Perfect | NC_000005.10:g.(27 486816_27489655)_( 27609204_27617078) del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 27,486,816 | 27,489,655 | 27,609,204 | 27,617,078 |
nssv4020745 | Submitted genomic | NC_000005.9:g.(274 86923_27489762)_(2 7609311_27617185)d el | GRCh37 (hg19) | NC_000005.9 | Chr5 | 27,486,923 | 27,489,762 | 27,609,311 | 27,617,185 |