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dbVar

Database of genomic structural variation

nsv1156868

Organism: Homo sapiens

Study:nstd97 (Lou et al. 2014)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:12,270

Publication(s):Lou et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 539 SVs from 84 studies. See in: genome view

Remapped(Score: Perfect):15,543,669-15,555,938

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1156868	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nsv1156868	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4020948	deletion	SNP array	SNP genotyping analysis	1
nssv4020949	deletion	SNP array	SNP genotyping analysis	1
nssv4020950	deletion	SNP array	SNP genotyping analysis	1
nssv4020951	duplication	SNP array	SNP genotyping analysis	3
nssv4020952	deletion	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4020948	Remapped	Perfect	NC_000008.11:g.(15 543669_15545551)_( 15554099_15555938) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nssv4020949	Remapped	Perfect	NC_000008.11:g.(15 543669_15545551)_( 15554099_15555938) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nssv4020950	Remapped	Perfect	NC_000008.11:g.(15 543669_15545551)_( 15554099_15555938) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nssv4020951	Remapped	Perfect	NC_000008.11:g.(15 543669_15545551)_( 15554099_15555938) dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nssv4020952	Remapped	Perfect	NC_000008.11:g.(15 543669_15545551)_( 15554099_15555938) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,543,669	15,545,551	15,554,099	15,555,938
nssv4020948	Submitted genomic		NC_000008.10:g.(15 401178_15403060)_( 15411608_15413447) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447
nssv4020949	Submitted genomic		NC_000008.10:g.(15 401178_15403060)_( 15411608_15413447) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447
nssv4020950	Submitted genomic		NC_000008.10:g.(15 401178_15403060)_( 15411608_15413447) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447
nssv4020951	Submitted genomic		NC_000008.10:g.(15 401178_15403060)_( 15411608_15413447) dup	GRCh37 (hg19)		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447
nssv4020952	Submitted genomic		NC_000008.10:g.(15 401178_15403060)_( 15411608_15413447) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,401,178	15,403,060	15,411,608	15,413,447

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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