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dbVar

Database of genomic structural variation

nsv1159711

Organism: Homo sapiens

Study:nstd106 (Alsmadi et al. 2014)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Alsmadi et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 115 SVs from 20 studies. See in: genome view

Remapped(Score: Perfect):81,294,883-81,294,883

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1159711	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	81,294,883	81,294,883	-
nsv1159711	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	36,736,318	36,736,318	-
nsv1159711	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	83,909,798	83,909,798	-
nsv1159711	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000022.10	Chr22	37,132,363	37,132,363	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv4024831	interchromosomal translocation	KWS2	Sequencing	Read depth and paired-end mapping	21,718

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv4024831	Remapped	Perfect	GRCh38.p12	First Pass	NC_000009.12	Chr9	81,294,883	81,294,883	-
nssv4024831	Remapped	Perfect	GRCh38.p12	First Pass	NC_000022.11	Chr22	36,736,318	36,736,318	-
nssv4024831	Submitted genomic		GRCh37 (hg19)		NC_000009.11	Chr9	83,909,798	83,909,798	-
nssv4024831	Submitted genomic		GRCh37 (hg19)		NC_000022.10	Chr22	37,132,363	37,132,363	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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