nsv1160439

Organism: Homo sapiens

Study:nstd111 (Lou et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:13
Validation:Not tested
Clinical Assertions: No
Region Size:13,394

Publication(s):Lou et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 944 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):78,337,711-78,351,104

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1160439	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nsv1160439	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4038993	deletion	SNP array	Probe signal intensity	1
nssv4038994	deletion	SNP array	Probe signal intensity	1
nssv4038995	deletion	SNP array	Probe signal intensity	1
nssv4038996	deletion	SNP array	Probe signal intensity	1
nssv4038997	duplication	SNP array	Probe signal intensity	3
nssv4038998	duplication	SNP array	Probe signal intensity	3
nssv4038999	deletion	SNP array	Probe signal intensity	1
nssv4039000	deletion	SNP array	Probe signal intensity	1
nssv4039001	deletion	SNP array	Probe signal intensity	1
nssv4039002	deletion	SNP array	Probe signal intensity	1
nssv4039003	deletion	SNP array	Probe signal intensity	1
nssv4039004	deletion	SNP array	Probe signal intensity	1
nssv4039005	deletion	SNP array	Probe signal intensity	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4038993	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038994	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038995	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038996	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038997	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038998	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038999	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039000	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039001	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039002	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039003	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039004	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4039005	Remapped	Perfect	NC_000016.10:g.(78 337711_78338543)_( 78350868_78351104) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	78,337,711	78,338,543	78,350,868	78,351,104
nssv4038993	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038994	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038995	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038996	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038997	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d up	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038998	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d up	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4038999	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039000	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039001	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039002	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039003	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039004	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001
nssv4039005	Submitted genomic		NC_000016.9:g.(783 71608_78372440)_(7 8384765_78385001)d el	GRCh37 (hg19)		NC_000016.9	Chr16	78,371,608	78,372,440	78,384,765	78,385,001

dbVar

Database of genomic structural variation

nsv1160439

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant