nsv1160512
- Organism: Homo sapiens
- Study:nstd111 (Lou et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:94,500
- Publication(s):Lou et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 426 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 426 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1160512 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 29,012,455 | 29,015,591 | 29,100,945 | 29,106,954 |
| nsv1160512 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 26,592,419 | 26,595,555 | 26,680,909 | 26,686,918 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4039457 | deletion | SNP array | Probe signal intensity | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4039457 | Remapped | Perfect | NC_000018.10:g.(29 012455_29015591)_( 29100945_29106954) del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 29,012,455 | 29,015,591 | 29,100,945 | 29,106,954 |
| nssv4039457 | Submitted genomic | NC_000018.9:g.(265 92419_26595555)_(2 6680909_26686918)d el | GRCh37 (hg19) | NC_000018.9 | Chr18 | 26,592,419 | 26,595,555 | 26,680,909 | 26,686,918 |