nsv1160752
- Organism: Homo sapiens
- Study:nstd111 (Lou et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:184,050
- Publication(s):Lou et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 591 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 594 SVs from 65 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv1160752 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 34,336,565 | 34,336,565 | 34,520,614 | 34,520,614 |
| nsv1160752 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 34,732,555 | 34,739,119 | 34,913,325 | 34,916,606 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv4040774 | deletion | SNP array | Probe signal intensity | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv4040774 | Remapped | Good | NC_000022.11:g.(34 336565_34336565)_( 34520614_34520614) del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 34,336,565 | 34,336,565 | 34,520,614 | 34,520,614 |
| nssv4040774 | Submitted genomic | NC_000022.10:g.(34 732555_34739119)_( 34913325_34916606) del | GRCh37 (hg19) | NC_000022.10 | Chr22 | 34,732,555 | 34,739,119 | 34,913,325 | 34,916,606 |