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dbVar

Database of genomic structural variation

nsv1161343

Organism: Homo sapiens

Study:nstd111 (Lou et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:176,340

Publication(s):Lou et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 570 SVs from 62 studies. See in: genome view

Remapped(Score: Good):21,861,465-22,037,804

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1161343	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	21,861,465	21,861,465	22,037,804	22,037,804
nsv1161343	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	21,861,696	21,863,899	22,036,867	22,038,033

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4034225	deletion	SNP array	Probe signal intensity	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4034225	Remapped	Good	NC_000006.12:g.(21 861465_21861465)_( 22037804_22037804) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	21,861,465	21,861,465	22,037,804	22,037,804
nssv4034225	Submitted genomic		NC_000006.11:g.(21 861696_21863899)_( 22036867_22038033) del	GRCh37 (hg19)		NC_000006.11	Chr6	21,861,696	21,863,899	22,036,867	22,038,033

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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