nsv1163550
- Organism: Homo sapiens
- Study:nstd109 (Wildschutte et al. 2015)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Wildschutte et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 129 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 129 SVs from 30 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1163550 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 90,432,250 | 90,432,250 |
| nsv1163550 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 93,194,532 | 93,194,532 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv4042638 | alu insertion | Sequencing | de novo and local sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4042638 | Remapped | Perfect | NC_000009.12:g.904 32250_90432251ins3 19 | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 90,432,250 | 90,432,250 |
| nssv4042638 | Submitted genomic | NC_000009.11:g.931 94532_93194533ins3 19 | GRCh37 (hg19) | NC_000009.11 | Chr9 | 93,194,532 | 93,194,532 |