nsv1163564
- Organism: Homo sapiens
- Study:nstd109 (Wildschutte et al. 2015)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Wildschutte et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 414 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 414 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1163564 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 122,435,459 | 122,435,459 |
| nsv1163564 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 121,569,312 | 121,569,312 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv4042652 | alu insertion | Sequencing | de novo and local sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4042652 | Remapped | Perfect | NC_000023.11:g.122 435459_122435460in s343 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 122,435,459 | 122,435,459 |
| nssv4042652 | Submitted genomic | NC_000023.10:g.121 569312_121569313in s343 | GRCh37 (hg19) | NC_000023.10 | ChrX | 121,569,312 | 121,569,312 |