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dbVar

Database of genomic structural variation

nsv1163571

Organism: Homo sapiens

Study:nstd109 (Wildschutte et al. 2015)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Wildschutte et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 456 SVs from 23 studies. See in: genome view

Remapped(Score: Perfect):139,662,308-139,662,308

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv1163571	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	139,662,308	139,662,308
nsv1163571	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	138,744,467	138,744,467

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv4042659	alu insertion	Sequencing	de novo and local sequence assembly

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv4042659	Remapped	Perfect	NC_000023.11:g.139 662308_139662309in s328	GRCh38.p12	First Pass	NC_000023.11	ChrX	139,662,308	139,662,308
nssv4042659	Submitted genomic		NC_000023.10:g.138 744467_138744468in s328	GRCh37 (hg19)		NC_000023.10	ChrX	138,744,467	138,744,467

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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