nsv1163578
- Organism: Homo sapiens
- Study:nstd109 (Wildschutte et al. 2015)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Wildschutte et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 511 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 504 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1163578 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 152,833,247 (-75, +75) | 152,833,247 (-75, +75) |
| nsv1163578 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 152,001,791 (-75, +75) | 152,001,791 (-75, +75) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv4042666 | alu insertion | Sequencing | de novo and local sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4042666 | Remapped | Perfect | NC_000023.11:g.(15 2833172_152833322) _(152833172_152833 322)ins466 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 152,833,247 (-75, +75) | 152,833,247 (-75, +75) |
| nssv4042666 | Submitted genomic | NC_000023.10:g.(15 2001716_152001866) _(152001716_152001 866)ins466 | GRCh37 (hg19) | NC_000023.10 | ChrX | 152,001,791 (-75, +75) | 152,001,791 (-75, +75) |