nsv1163580
- Organism: Homo sapiens
- Study:nstd109 (Wildschutte et al. 2015)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Wildschutte et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 463 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 464 SVs from 39 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1163580 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 22,346,955 (-75, +75) | 22,346,955 (-75, +75) |
| nsv1163580 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 22,365,072 (-75, +75) | 22,365,072 (-75, +75) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv4042668 | alu insertion | Sequencing | de novo and local sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4042668 | Remapped | Perfect | NC_000023.11:g.(22 346880_22347030)_( 22346880_22347030) ins427 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 22,346,955 (-75, +75) | 22,346,955 (-75, +75) |
| nssv4042668 | Submitted genomic | NC_000023.10:g.(22 364997_22365147)_( 22364997_22365147) ins427 | GRCh37 (hg19) | NC_000023.10 | ChrX | 22,365,072 (-75, +75) | 22,365,072 (-75, +75) |