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dbVar

Database of genomic structural variation

nsv147

Organism: Homo sapiens

Study:nstd1 (Tuzun et al. 2005)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:69,684

Publication(s):Tuzun et al. 2005

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1031 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):55,742,368-55,812,051

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv147	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	55,742,368	55,812,051
nsv147	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	55,776,280	55,845,963
nsv147	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000016.8	Chr16	54,333,781	54,403,464

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv147	inversion	SAMN00000376	Sequencing	Paired-end mapping	297

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv147	Remapped	Perfect	NC_000016.10:g.(55 742368_?)_(?_55812 051)inv	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,742,368	55,812,051
nssv147	Remapped	Perfect	NC_000016.9:g.(557 76280_?)_(?_558459 63)inv	GRCh37.p13	First Pass	NC_000016.9	Chr16	55,776,280	55,845,963
nssv147	Submitted genomic		NC_000016.8:g.(543 33781_?)_(?_544034 64)inv	NCBI35 (hg17)		NC_000016.8	Chr16	54,333,781	54,403,464

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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