nsv148
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,428
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 356 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 356 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 6 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv148 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 55,816,263 | 55,821,690 |
| nsv148 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 55,850,175 | 55,855,602 |
| nsv148 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000016.8 | Chr16 | 54,407,676 | 54,413,103 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv148 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv148 | Remapped | Perfect | NC_000016.10:g.(55 816263_?)_(?_55821 690)inv | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 55,816,263 | 55,821,690 |
| nssv148 | Remapped | Perfect | NC_000016.9:g.(558 50175_?)_(?_558556 02)inv | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 55,850,175 | 55,855,602 |
| nssv148 | Submitted genomic | NC_000016.8:g.(544 07676_?)_(?_544131 03)inv | NCBI35 (hg17) | NC_000016.8 | Chr16 | 54,407,676 | 54,413,103 |