nsv18
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:27,884
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 695 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 695 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 15 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv18 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 158,901,179 | 158,929,062 |
| nsv18 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 158,693,870 | 158,721,753 |
| nsv18 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 158,193,346 | 158,221,229 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18 | Remapped | Perfect | NC_000007.14:g.(15 8901179_?)_(?_1589 29062)ins9165 | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 158,901,179 | 158,929,062 |
| nssv18 | Remapped | Perfect | NC_000007.13:g.(15 8693870_?)_(?_1587 21753)ins9165 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 158,693,870 | 158,721,753 |
| nssv18 | Submitted genomic | NC_000007.11:g.(15 8193346_?)_(?_1582 21229)ins9165 | NCBI35 (hg17) | NC_000007.11 | Chr7 | 158,193,346 | 158,221,229 |