nsv184
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:48,256
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1071 SVs from 84 studies. See in: genome view
Overlapping variant regions from other studies: 1071 SVs from 84 studies. See in: genome view
Overlapping variant regions from other studies: 12 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv184 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 1,570,746 | 1,619,001 |
| nsv184 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000020.10 | Chr20 | 1,551,392 | 1,599,647 |
| nsv184 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000020.9 | Chr20 | 1,499,392 | 1,547,647 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv184 | deletion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv184 | Remapped | Perfect | NC_000020.11:g.(15 70746_?)_(?_161900 1)del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 1,570,746 | 1,619,001 |
| nssv184 | Remapped | Perfect | NC_000020.10:g.(15 51392_?)_(?_159964 7)del | GRCh37.p13 | First Pass | NC_000020.10 | Chr20 | 1,551,392 | 1,599,647 |
| nssv184 | Submitted genomic | NC_000020.9:g.(149 9392_?)_(?_1547647 )del33537 | NCBI35 (hg17) | NC_000020.9 | Chr20 | 1,499,392 | 1,547,647 |