nsv203
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,275
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 473 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 479 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 14 studies. See in: genome view
Overlapping variant regions from other studies: 64 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv203 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 46,928,984 | 46,951,258 | - |
| nsv203 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 46,788,419 | - | 46,811,870 |
| nsv203 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_004166866.1 | ChrX|NW_00 4166866.1 | 178,545 | 200,819 | - |
| nsv203 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000023.8 | ChrX | 46,544,673 | - | 46,568,124 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv203 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv203 | Remapped | Pass | NC_000023.11:g.(46 928984_?)_(4695125 8_?)inv | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 46,928,984 | 46,951,258 | - |
| nssv203 | Remapped | Pass | NW_004166866.1:g.( 178545_?)_(200819_ ?)inv | GRCh37.p13 | Second Pass | NW_004166866.1 | ChrX|NW_00 4166866.1 | 178,545 | 200,819 | - |
| nssv203 | Remapped | Perfect | NC_000023.10:g.(46 788419_?)_(?_46811 870)inv | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 46,788,419 | - | 46,811,870 |
| nssv203 | Submitted genomic | NC_000023.8:g.(465 44673_?)_(?_465681 24)inv | NCBI35 (hg17) | NC_000023.8 | ChrX | 46,544,673 | - | 46,568,124 |