nsv2741396
- Organism: Homo sapiens
- Study:nstd130 (Leppa et al. 2016)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,384,951
- Publication(s):Leppa et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2148 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 2464 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 876 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2741396 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 36,034,953 | 46,419,903 |
| nsv2741396 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 35,269,324 | 46,453,815 |
| nsv2741396 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 35,126,825 | 45,011,316 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv13566674 | deletion | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv13566674 | Remapped | Pass | NC_000016.10:g.(?_ 36034953)_(4641990 3_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 36,034,953 | 46,419,903 |
| nssv13566674 | Remapped | Pass | NC_000016.9:g.(?_3 5269324)_(46453815 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 35,269,324 | 46,453,815 |
| nssv13566674 | Submitted genomic | NC_000016.8:g.(?_3 5126825)_(45011316 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 35,126,825 | 45,011,316 |