nsv2742875
- Organism: Homo sapiens
- Study:nstd130 (Leppa et al. 2016)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:205,863
- Publication(s):Leppa et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 597 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 597 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 130 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2742875 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 66,843,174 | 67,049,036 |
| nsv2742875 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 66,610,645 | 66,816,507 |
| nsv2742875 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 66,367,221 | 66,573,083 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv13544975 | duplication | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv13544975 | Remapped | Perfect | NC_000011.10:g.(?_ 66843174)_(6704903 6_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 66,843,174 | 67,049,036 |
| nssv13544975 | Remapped | Perfect | NC_000011.9:g.(?_6 6610645)_(66816507 _?)dup | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 66,610,645 | 66,816,507 |
| nssv13544975 | Submitted genomic | NC_000011.8:g.(?_6 6367221)_(66573083 _?)dup | NCBI36 (hg18) | NC_000011.8 | Chr11 | 66,367,221 | 66,573,083 |