nsv2783815
- Organism: Homo sapiens
- Study:nstd132 (Walker et al. 2017)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:342,729
- Publication(s):Walker et al. 2017
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 743 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 743 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2783815 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 115,797,799 | 116,140,527 |
| nsv2783815 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 115,437,853 | 115,780,581 |
| nsv2783815 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 115,225,089 | 115,567,817 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv13672686 | copy number loss | CGPQ-1452 | SNP array | Genotyping | 35 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv13672686 | Remapped | Perfect | NC_000007.14:g.(?_ 115797799)_(116140 527_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 115,797,799 | 116,140,527 |
| nssv13672686 | Remapped | Perfect | NC_000007.13:g.(?_ 115437853)_(115780 581_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 115,437,853 | 115,780,581 |
| nssv13672686 | Submitted genomic | NC_000007.12:g.(?_ 115225089)_(115567 817_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 115,225,089 | 115,567,817 |