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nsv2787037

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:20,632

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 190 SVs from 37 studies. See in: genome view    
Remapped(Score: Perfect):31,765,689-31,786,319Question Mark
Overlapping variant regions from other studies: 43 SVs from 10 studies. See in: genome view    
Remapped(Score: Good):3,107,578-3,128,209Question Mark
Overlapping variant regions from other studies: 43 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,064,981-3,085,611Question Mark
Overlapping variant regions from other studies: 44 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,013,463-3,034,093Question Mark
Overlapping variant regions from other studies: 47 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,098,301-3,118,931Question Mark
Overlapping variant regions from other studies: 190 SVs from 37 studies. See in: genome view    
Remapped(Score: Perfect):31,733,466-31,754,096Question Mark
Overlapping variant regions from other studies: 44 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,019,048-3,039,678Question Mark
Overlapping variant regions from other studies: 43 SVs from 10 studies. See in: genome view    
Remapped(Score: Good):3,113,163-3,133,794Question Mark
Overlapping variant regions from other studies: 43 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,064,279-3,084,909Question Mark
Overlapping variant regions from other studies: 47 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):3,048,217-3,068,847Question Mark
Overlapping variant regions from other studies: 53 SVs from 11 studies. See in: genome view    
Submitted genomic31,841,445-31,862,075Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2787037RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr631,765,68931,786,319
nsv2787037RemappedGoodGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		3,107,5783,128,209
nsv2787037RemappedPerfectGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		3,064,9813,085,611
nsv2787037RemappedPerfectGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2		3,013,4633,034,093
nsv2787037RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_167244.2Chr6|NT_16
7244.2		3,098,3013,118,931
nsv2787037RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr631,733,46631,754,096
nsv2787037RemappedPerfectGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1		3,019,0483,039,678
nsv2787037RemappedGoodGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		3,113,1633,133,794
nsv2787037RemappedPerfectGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		3,064,2793,084,909
nsv2787037RemappedPerfectGRCh37.p13ALT_REF_LOCI_1Second PassNT_167244.1Chr6|NT_16
7244.1		3,048,2173,068,847
nsv2787037Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr631,841,44531,862,075

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv13671150copy number lossCGPQ-272SNP arrayGenotyping19

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13671150RemappedPerfectNT_167249.2:g.(?_3
064981)_(3085611_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,064,9813,085,611
nssv13671150RemappedGoodNT_167247.2:g.(?_3
107578)_(3128209_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,107,5783,128,209
nssv13671150RemappedPerfectNT_167245.2:g.(?_3
013463)_(3034093_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,013,4633,034,093
nssv13671150RemappedPerfectNT_167244.2:g.(?_3
098301)_(3118931_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		3,098,3013,118,931
nssv13671150RemappedPerfectNC_000006.12:g.(?_
31765689)_(3178631
9_?)del		GRCh38.p12First PassNC_000006.12Chr631,765,68931,786,319
nssv13671150RemappedPerfectNT_167245.1:g.(?_3
019048)_(3039678_?
)delNT_167245.1:g.
(?_3019048)_(30396
78_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,019,0483,039,678
nssv13671150RemappedPerfectNT_167244.1:g.(?_3
048217)_(3068847_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		3,048,2173,068,847
nssv13671150RemappedPerfectNT_167249.1:g.(?_3
064279)_(3084909_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,064,2793,084,909
nssv13671150RemappedGoodNT_167247.1:g.(?_3
113163)_(3133794_?
)delNT_167247.1:g.
(?_3113163)_(31337
94_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,113,1633,133,794
nssv13671150RemappedPerfectNC_000006.11:g.(?_
31733466)_(3175409
6_?)del		GRCh37.p13First PassNC_000006.11Chr631,733,46631,754,096
nssv13671150Submitted genomicNC_000006.10:g.(?_
31841445)_(3186207
5_?)del		NCBI36 (hg18)NC_000006.10Chr631,841,44531,862,075

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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