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nsv2787416

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:27,189

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 215 SVs from 39 studies. See in: genome view    
Remapped(Score: Perfect):31,765,689-31,792,877Question Mark
Overlapping variant regions from other studies: 54 SVs from 11 studies. See in: genome view    
Remapped(Score: Perfect):3,107,578-3,134,766Question Mark
Overlapping variant regions from other studies: 51 SVs from 11 studies. See in: genome view    
Remapped(Score: Good):3,064,981-3,092,168Question Mark
Overlapping variant regions from other studies: 55 SVs from 11 studies. See in: genome view    
Remapped(Score: Perfect):3,013,463-3,040,651Question Mark
Overlapping variant regions from other studies: 58 SVs from 11 studies. See in: genome view    
Remapped(Score: Good):3,098,301-3,125,488Question Mark
Overlapping variant regions from other studies: 215 SVs from 39 studies. See in: genome view    
Remapped(Score: Perfect):31,733,466-31,760,654Question Mark
Overlapping variant regions from other studies: 55 SVs from 11 studies. See in: genome view    
Remapped(Score: Perfect):3,019,048-3,046,236Question Mark
Overlapping variant regions from other studies: 54 SVs from 11 studies. See in: genome view    
Remapped(Score: Perfect):3,113,163-3,140,351Question Mark
Overlapping variant regions from other studies: 51 SVs from 11 studies. See in: genome view    
Remapped(Score: Good):3,064,279-3,091,466Question Mark
Overlapping variant regions from other studies: 58 SVs from 11 studies. See in: genome view    
Remapped(Score: Good):3,048,217-3,075,404Question Mark
Overlapping variant regions from other studies: 63 SVs from 11 studies. See in: genome view    
Submitted genomic31,841,445-31,868,633Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2787416RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr631,765,68931,792,877
nsv2787416RemappedPerfectGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		3,107,5783,134,766
nsv2787416RemappedGoodGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		3,064,9813,092,168
nsv2787416RemappedPerfectGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2		3,013,4633,040,651
nsv2787416RemappedGoodGRCh38.p12ALT_REF_LOCI_1Second PassNT_167244.2Chr6|NT_16
7244.2		3,098,3013,125,488
nsv2787416RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr631,733,46631,760,654
nsv2787416RemappedPerfectGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1		3,019,0483,046,236
nsv2787416RemappedPerfectGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		3,113,1633,140,351
nsv2787416RemappedGoodGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		3,064,2793,091,466
nsv2787416RemappedGoodGRCh37.p13ALT_REF_LOCI_1Second PassNT_167244.1Chr6|NT_16
7244.1		3,048,2173,075,404
nsv2787416Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr631,841,44531,868,633

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv13671152copy number lossCGPQ-235SNP arrayGenotyping53

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13671152RemappedGoodNT_167249.2:g.(?_3
064981)_(3092168_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,064,9813,092,168
nssv13671152RemappedPerfectNT_167247.2:g.(?_3
107578)_(3134766_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,107,5783,134,766
nssv13671152RemappedPerfectNT_167245.2:g.(?_3
013463)_(3040651_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,013,4633,040,651
nssv13671152RemappedGoodNT_167244.2:g.(?_3
098301)_(3125488_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		3,098,3013,125,488
nssv13671152RemappedPerfectNC_000006.12:g.(?_
31765689)_(3179287
7_?)del		GRCh38.p12First PassNC_000006.12Chr631,765,68931,792,877
nssv13671152RemappedPerfectNT_167245.1:g.(?_3
019048)_(3046236_?
)delNT_167245.1:g.
(?_3019048)_(30462
36_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,019,0483,046,236
nssv13671152RemappedGoodNT_167244.1:g.(?_3
048217)_(3075404_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		3,048,2173,075,404
nssv13671152RemappedGoodNT_167249.1:g.(?_3
064279)_(3091466_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,064,2793,091,466
nssv13671152RemappedPerfectNT_167247.1:g.(?_3
113163)_(3140351_?
)delNT_167247.1:g.
(?_3113163)_(31403
51_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,113,1633,140,351
nssv13671152RemappedPerfectNC_000006.11:g.(?_
31733466)_(3176065
4_?)del		GRCh37.p13First PassNC_000006.11Chr631,733,46631,760,654
nssv13671152Submitted genomicNC_000006.10:g.(?_
31841445)_(3186863
3_?)del		NCBI36 (hg18)NC_000006.10Chr631,841,44531,868,633

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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